A Brief Introduction to Scientific Data Mining:

altnormstyle: Affects very subtle details in normalization formula. Default is YES (normalization formulas of Patterson et al. 2006) To match EIGENSTRAT (normalization formulas of Price et al. 2006), set to NO. missingmode: If set to YES, then instead of doing PCA on # reference alleles, do PCA on whether each data point is missing or nonmissing. ................
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