Introduction to Python
[Pages:32]Introduction to Python
Computational Genomics Weiguang (Wayne) Mao
Significant content courtesy by Marta Wells
Why or Why not
? Easy to install/learn ? Popular ? well documented ? Free, open source ? Supports (72, 747 packages)
? Legacy ? Your mission ? There's Only Way To Do It!
Powerful language for scripting
Python vs Matlab
? Data structures (from scratch) ? Web spider, etc
? Simulink ? Computer Vision, etc ? Matrix tradition
Versions
? Python 2.7.11 is legacy and the default choice ? Python 3.5.1 is current ? Not fully compatible
Installation
How to run python scripts
? Install python/anaconda ? Confirm the path (especially multiple pythons) ? python myscript.py
IDE (Integrated Development Environment)
? Eclipse (PyDev) ? iPython (interactive)
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