Getting Started with Analysis in Python: NumPy, Pandas and Plotting
Getting Started with Analysis in Python: NumPy, Pandas and Plotting
Bioinformatics and Research Computing (BaRC)
Python Packages
? Efficient and reusable
? Avoid re-writing code ? More flexibility
? Use the "import" command to use a package
import numpy as np
? Packages covered in this workshop:
? NumPy ? Pandas ? Graphical: matplotlib, plotly and seaborn
2
Harris, C.K., et al. Array Programing with NumPy Nature (2020)
3
NumPy
? Numerical Python ? Efficient multidimensional array processing
and operations
? Linear algebra (matrix operations) ? Mathematical functions
? An array is a type of data structure ? Array (objects) must be of the same type
>>>import numpy as np >>>np.array([1,2,3,4],float)
4
(NumPy) Array Concepts
Harris, C.K., et al. Array Programing with NumPy Nature (2020)
5
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