Scientific Python for Matlab users - NIH HPC Systems

[Pages:67]Scientific Python for Matlab users

Antonio Ulloa, PhD HPC @ NIH

aunltloanpioe.ruellzoaa@@nnihih.g.goovv July 9, 2019

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Outline

? Goal ? Motivation ? Historical perspective ? Python vs Matlab ? Scientific Python ? Python environments ? Hands-on examples ? Conclusion

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GOAL

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Goal

? To provide Matlab users with a rough introduction to coding in Python (on Biowulf)

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MOTIVATION

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Motivation

? Limited Matlab licenses on Biowulf ? Matlab IDE too slow for working interactively ? Need to compile for launching batch jobs

(compiler also needs a license) ? Useful to be familiar with other languages ? Need to share with more collaborators ? Difficult to use Matlab code after leaving NIH ? Need for more transferable skills

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HISTORICAL PERSPECTIVE

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