Organic Chemistry II Final Exam
Organic
Chemistry
II
Final
Exam
Name:
Signature:
Recitation
Instructor:
Instructions.
There
are
6
sections.
The
first
thing
you
should
do
is
make
sure
all
of
the
questions
are
here,
and
if
not,
notify
a
proctor
immediate.
You
have
2
hours
to
complete
the
exam.
Note
that
4b
is
a
"Grand
Challenge",
denoted
with
a
star(*).
That
one
might
take
a
while.
It
is
only
10
points.
I
would
advise
that
you
save
it
for
last.
Good
luck!
1.
___
Summary
of
All
Reactions
(20
Points)
2.
___
Transition
Metal
C-C
Formation
Mechanisms
(10
Points)
3.
___
Lipids/Nucleic
Acids/Peptides
(20
Points)
4.
___
Prediction
of
Diastereoselectivity
(15
Points)
5.
___
Mechanisms
(15
points)
6.
___
Synthesis
(20
Points)
2
Pages
1. Summart
of
all
reactions.
You
have
learned
a
LOT
of
reactions
over
the
last
few
years.
Go
show
me
what
you
remember.
(20
points,
1
point
per
reaction)
1
RO
R NH2
R
2 R
Br 3
R
R
4
RO
R OH
R
OEt
7
RO
RO
R
5 R
OH R
OH
8
R
R
Br 6 R
Br 9
Me
R
10
RO
R
OH 13
RO
Cl RO
16 R OH
RO
11
O
O
R
RO
12
R OH
R OMe
R
14 R
Me R
15
OMe
Br
R
17 R OH
R Br
OH 18 RO
NHMe RO
19
Me
NH2 20
N2
Cl
Put
the
above
reaction
#
next
to
the
appropriate
reagents.
__ a. PBr3 __ b. MeBr, Pd(0), Et3N __ c. CH2N2 __ d. Me4Sn, Pd(0) __ e. O3; Me2S __ f. NaBH4 __ g. NH3; NaCNBH3
__ h. PCC __ i. SOCl2 __ j. H2O, H2SO4 __ k. NaNH2 __ l. MeOH, Br2 __ m. MeNH2, DCC __ n. Ph3P=CH2
__ o. DIBAL-H __ p. BH3; H2O2 __ q. Pd/C, H2 __ r. MeCl, AlCl3 __ s. NaNO2, HCl __ t. t-BuOK
2.
Transition
Metal
C-C
Bond
Forming
Mechanisms
2a.
Demonstrate
your
understanding
of
the
Stille
Cross--Coupoing
Reaction
by
Filling
in
the
missing
components
of
the
Stille
catalytic
cycle.
(5
points)
d.
R1Br
Pd(0)
R1-Br
R 2-SnMe3 Pd(0)
R1 R2
c.
a.
b.
R 2SnMe3
2b.
Show
the
mechanism
of
the
following
Ring--Opening--Cross--Metathesis.
(5
points)
Ru= +
3.
Nucleic
Acids/Peptides/Lipids
3a. Redraw the pyrimidine base next to the paired purine base and show the hydrogen bonds
that exist during the DNA double helix. (8 points).
purine bases
NH2
N
N
N R
N
pyrimidine bases
pyrimidine bases NH2
N ON
R
O HN ON
R
O
N
NH
N R
N
NH2
3b. Which of the following statements is the central dogma of molecular biology? (4 points)
a. RNA makes DNA which makes Proteins
b. DNA makes protein which make RNA
c. DNA makes RNA which makes proteins
d. Proteins make DNA which make RNA
e. Kevin Smith made Dogma featuring Ben Affleck and Matt Damon
3c. Circle the compounds that you would expect to be terpenes (4 points)
O OH HO
O HO
OH O
O OH HO
O OH HO
O O
CO2H
3d. Which of the following is an accurate depiction of a micelle in an aqueous solution (4 points)
hydrophobic tail
hydrophilic head
4.
Prediction
of
Diastereoselectivity
4a. Show the Diels-Alder product of the following reaction, making sure to address the correct stereochemistry. You do not need to show the transition state leading to the correct diastereomer, but can if it helps you (5 points)
Me
Me
4b.* There are some parallels between the mechanism of certain Aldol-like reactions (below) and
Cope rearrangments, and thus also similarities of diastereoselectivity. With this in mind, using
what you know about the Cope rearrangment's chair-like transition state, predict the
diastereoselectivity of the following Aldol reaction. Keep in mind that the coordination of the
boron to the carbonyl is reversible, offering two options for transition states, one of which is higher
energy then the other. You must show the chair-like transition state for full credit (10 points)
Cope =
Aldol OBR2 O
R2 B OO
O OBR2
OBR2
O
+
O OBR2
................
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