Multivariate regression analysis python

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Multivariate regression analysis python

In this post, we will provide an example of machine learning regression algorithm using the multivariate linear regression in Python from scikit-learn library in Python. The example contains the following steps: Step 1: Import libraries and load the data into the environment. Step 2: Generate the features of the model that are related with some measure of volatility, price and volume. Step 3: Visualize the correlation between the features and target variable with scatterplots. Step 4: Create the train and test dataset and fit the model using the linear regression algorithm. Step 5: Make predictions, obtain the performance of the model, and plot the results. Step 1: Import libraries and load the data into the environment. We will first import the required libraries in our Python environment. import pandas as pd from datetime import datetime import numpy as np from sklearn.linear_model import LinearRegression import matplotlib.pyplot as plt We will work with SPY data between dates 2010-01-04 to 2015-12-07. SPY_regression DataDownload First we use the read_csv() method to load the csv file into the environment. Make sure to update the file path to your directory structure. SPY_data = pd.read_csv("C:/Users/FT/Documents/MachineLearningCourse/SPY_regression.csv") # Change the Date column from object to datetime object SPY_data["Date"] = pd.to_datetime(SPY_data["Date"]) # Preview the data SPY_data.head(10) The data has the following structure: Date Open High Low Close Volume Adj Close 0 2015-12-07 2090.419922 2090.419922 2066.780029 2077.070068 4.043820e+09 2077.070068 1 2015-12-04 2051.239990 2093.840088 2051.239990 2091.689941 4.214910e+09 2091.689941 2 2015-12-03 2080.709961 2085.000000 2042.349976 2049.620117 4.306490e+09 2049.620117 3 2015-12-02 2101.709961 2104.270020 2077.110107 2079.510010 3.950640e+09 2079.510010 4 2015-12-01 2082.929932 2103.370117 2082.929932 2102.629883 3.712120e+09 2102.629883 5 2015-11-30 2090.949951 2093.810059 2080.409912 2080.409912 4.245030e+09 2080.409912 6 2015-11-27 2088.820068 2093.290039 2084.129883 2090.110107 1.466840e+09 2090.110107 7 2015-11-25 2089.300049 2093.000000 2086.300049 2088.870117 2.852940e+09 2088.870117 8 2015-11-24 2084.419922 2094.120117 2070.290039 2089.139893 3.884930e+09 2089.139893 9 2015-11-23 2089.409912 2095.610107 2081.389893 2086.590088 3.587980e+09 2086.590088 Let's now set the Date as index and reverse the order of the dataframe in order to have oldest values at top. # Set Date as index SPY_data.set_index('Date',inplace=True) # Reverse the order of the dataframe in order to have oldest values at top SPY_data.sort_values('Date',ascending=True) Step 2: Generate features of the model We will generate the following features of the model: High ? Low percent change5 periods Exponential Moving AverageStandard deviation of the price over the past 5 days Daily volume percent change Average volume for the past 5 days Volume over close price ratio SPY_data['High-Low_pct'] = (SPY_data['High'] - SPY_data['Low']).pct_change() SPY_data['ewm_5'] = SPY_data["Close"].ewm(span=5).mean().shift(periods=1) SPY_data['price_std_5'] = SPY_data["Close"].rolling(center=False,window= 30).std().shift(periods=1) SPY_data['volume Change'] = SPY_data['Volume'].pct_change() SPY_data['volume_avg_5'] = SPY_data["Volume"].rolling(center=False,window=5).mean().shift(periods=1) SPY_data['volume Close'] = SPY_data["Volume"].rolling(center=False,window=5).std().shift(periods=1) Step 3: Visualize the correlation between the features and target variable Before training the dataset, we will make some plots to observe the correlations between the features and the target variable. jet= plt.get_cmap('jet') colors = iter(jet(np.linspace(0,1,10))) def correlation(df,variables, n_rows, n_cols): fig = plt.figure(figsize=(8,6)) #fig = plt.figure(figsize=(14,9)) for i, var in enumerate(variables): ax = fig.add_subplot(n_rows,n_cols,i+1) asset = df.loc[:,var] ax.scatter(df["Adj Close"], asset, c = next(colors)) ax.set_xlabel("Adj Close") ax.set_ylabel("{}".format(var)) ax.set_title(var +" vs price") fig.tight_layout() plt.show() # Take the name of the last 6 columns of the SPY_data which are the model features variables = SPY_data.columns[-6:] correlation(SPY_data,variables,3,3) Correlations between Features and Target Variable (Adj Close) The correlation matrix between the features and the target variable has the following values: SPY_data.corr()['Adj Close'].loc[variables] High-Low_pct -0.010328 ewm_5 0.998513 price_std_5 0.100524 volume Change -0.005446 volume_avg_5 -0.485734 volume Close -0.241898 Either the scatterplot or the correlation matrix reflects that the Exponential Moving Average for 5 periods is very highly correlated with the Adj Close variable. Secondly is possible to observe a negative correlation between Adj Close and the volume average for 5 days and with the volume to Close ratio. Step 4: Train the Dataset and Fit the model Due to the feature calculation, the SPY_data contains some NaN values that correspond to the first's rows of the exponential and moving average columns. We will see how many Nan values there are in each column and then remove these rows. SPY_data.isnull().sum().loc[variables] High-Low_pct 1 ewm_5 1 price_std_5 30 volume Change 1 volume_avg_5 5 volume Close 5 # To train the model is necessary to drop any missing value in the dataset. SPY_data = SPY_data.dropna(axis=0) # Generate the train and test sets train = SPY_data[SPY_data.index < datetime(year=2015, month=1, day=1)] test = SPY_data[SPY_data.index >= datetime(year=2015, month=1, day=1)] dates = test.index Step 5: Make predictions, obtain the performance of the model, and plot the results In this step, we will fit the model with the LinearRegression classifier. We are trying to predict the Adj Close value of the Standard and Poor's index. # So the target of the model is the "Adj Close" Column. lr = LinearRegression() X_train = train[["High-Low_pct","ewm_5","price_std_5","volume_avg_5","volume Change","volume Close"]] Y_train = train["Adj Close"] lr.fit(X_train,Y_train) Create the test features dataset (X_test) which will be used to make the predictions. # Create the test features dataset (X_test) which will be used to make the predictions. X_test = test[["High-Low_pct","ewm_5","price_std_5","volume_avg_5","volume Change","volume Close"]].values # The labels of the model Y_test = test["Adj Close"].values Predict the Adj Close values using the X_test dataframe and Compute the Mean Squared Error between the predictions and the real observations. close_predictions = lr.predict(X_test) mae = sum(abs(close_predictions - test["Adj Close"].values)) / test.shape[0] print(mae) 18.0904 We have that the Mean Absolute Error of the model is 18.0904. This metric is more intuitive than others such as the Mean Squared Error, in terms of how close the predictions were to the real price. Finally we will plot the error term for the last 25 days of the test dataset. This allows observing how long is the error term in each of the days, and asses the performance of the model by date. # Create a dataframe that output the Date, the Actual and the predicted values df = pd.DataFrame({'Date':dates,'Actual': Y_test, 'Predicted': close_predictions}) df1 = df.tail(25) # set the date with string format for plotting df1['Date'] = df1['Date'].dt.strftime('%Y-%m-%d') df1.set_index('Date',inplace=True) error = df1['Actual'] - df1['Predicted'] # Plot the error term between the actual and predicted values for the last 25 days error.plot(kind='bar',figsize=(8,6)) plt.grid(which='major', linestyle='-', linewidth='0.5', color='green') plt.grid(which='minor', linestyle=':', linewidth='0.5', color='black') plt.xticks(rotation=45) plt.show() Error Term by date This concludes our example of Multivariate Linear Regression in Python. Multiple regression is like linear regression, but with more than one independent value, meaning that we try to predict a value based on two or more variables. Take a look at the data set below, it contains some information about cars. We can predict the CO2 emission of a car based on the size of the engine, but with multiple regression we can throw in more variables, like the weight of the car, to make the prediction more accurate. How Does it Work? In Python we have modules that will do the work for us. Start by importing the Pandas module. Learn about the Pandas module in our Pandas Tutorial. The Pandas module allows us to read csv files and return a DataFrame object. The file is meant for testing purposes only, you can download it here: cars.csv df = pandas.read_csv("cars.csv") Then make a list of the independent values and call this variable X. Put the dependent values in a variable called y. X = df[['Weight', 'Volume']] y = df['CO2'] Tip: It is common to name the list of independent values with a upper case X, and the list of dependent values with a lower case y. We will use some methods from the sklearn module, so we will have to import that module as well: from sklearn import linear_model From the sklearn module we will use the LinearRegression() method to create a linear regression object. This object has a method called fit() that takes the independent and dependent values as parameters and fills the regression object with data that describes the relationship: regr = linear_model.LinearRegression() regr.fit(X, y) Now we have a regression object that are ready to predict CO2 values based on a car's weight and volume: #predict the CO2 emission of a car where the weight is 2300kg, and the volume is 1300cm3: predictedCO2 = regr.predict([[2300, 1300]]) See the whole example in action: import pandasfrom sklearn import linear_modeldf = pandas.read_csv("cars.csv") X = df[['Weight', 'Volume']]y = df['CO2']regr = linear_model.LinearRegression()regr.fit(X, y)#predict the CO2 emission of a car where the weight is 2300kg, and the volume is 1300cm3: predictedCO2 = regr.predict([[2300, 1300]]) print(predictedCO2) Result: Run example ? We have predicted that a car with 1.3 liter engine, and a weight of 2300 kg, will release approximately 107 grams of CO2 for every kilometer it drives. Coefficient The coefficient is a factor that describes the relationship with an unknown variable. Example: if x is a variable, then 2x is x two times. x is the unknown variable, and the number 2 is the coefficient. In this case, we can ask for the coefficient value of weight against CO2, and for volume against CO2. The answer(s) we get tells us what would happen if we increase, or decrease, one of the independent values. Print the coefficient values of the regression object: import pandasfrom sklearn import linear_modeldf = pandas.read_csv("cars.csv") X = df[['Weight', 'Volume']]y = df['CO2']regr = linear_model.LinearRegression()regr.fit(X, y)print(regr.coef_) Result: Run example ? Result Explained The result array represents the coefficient values of weight and volume. Weight: 0.00755095 Volume: 0.00780526 These values tell us that if the weight increase by 1kg, the CO2 emission increases by 0.00755095g. And if the engine size (Volume) increases by 1 cm3, the CO2 emission increases by 0.00780526 g. I think that is a fair guess, but let test it! We have already predicted that if a car with a 1300cm3 engine weighs 2300kg, the CO2 emission will be approximately 107g. What if we increase the weight with 1000kg? Copy the example from before, but change the weight from 2300 to 3300: import pandasfrom sklearn import linear_modeldf = pandas.read_csv("cars.csv") X = df[['Weight', 'Volume']]y = df['CO2']regr = linear_model.LinearRegression()regr.fit(X, y)predictedCO2 = regr.predict([[3300, 1300]]) print(predictedCO2) Result: Run example ? We have predicted that a car with 1.3 liter engine, and a weight of 3300 kg, will release approximately 115 grams of CO2 for every kilometer it drives. Which shows that the coefficient of 0.00755095 is correct: 107.2087328 + (1000 * 0.00755095) = 114.75968

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